Insertion junction: CLIP2.030329_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030329
Chromosome:chromosome 11
Location:4091806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481093 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGCCATGCCAACTACTGGTATACCACGAGGGGGACAGGGGATTGTG
Internal bar code:TACGCATTGGTAATGTCTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCTCGTCATCGCTCTC
Suggested primer 2:GCACATTTGCCGTACTTGCA