Insertion junction: CLIP2.030330_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030330
Chromosome:chromosome 12
Location:4329395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518950 PGM13 (1 of 2) PTHR23029//PTHR23029:SF12 - PHOSPHOGLYCERATE MUTASE // PHOSPHOMUTASE PMU1-RELATED; Phosphoglycerate mutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCGGTGGCGAGGGCGTGGAGGGCACGCTGGTGAAACGGCTAGGGTGC
Internal bar code:CAAGAACTGCTGGCACTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1437
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACACCGCTCACTCACC
Suggested primer 2:ATTGACAGAAGGGGACGCAG