Insertion junction: CLIP2.030333_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030333
Chromosome:chromosome 12
Location:1599506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487101 CSV9 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGCAGCAGCAGCTGCAAAAGTTGTCGCCGAGGCAGCCACGGCCGCAC
Internal bar code:TAACTTCAATAAGTCTTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTGATGGGTTGAGGACA
Suggested primer 2:GATTCGGCTGAGTACGCGTA