Insertion junction: CLIP2.030338_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030338
Chromosome:chromosome 12
Location:9373789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541650 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGCAGGTCCGTGGCGGGGTGTGGCTTTGTATGCGTCCTGGGGAAGC
Internal bar code:GGGATCCCGTTAGCCGTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1339
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCACCGTACGTACTGCAA
Suggested primer 2:AGCTTCGTAAGGTCCTGCAC