Insertion junction: CLIP2.030339_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030339
Chromosome:chromosome 17
Location:5345423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738100 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGTGGGAGGGTCAGCGCCAGCGGTGCCAGTGGTGGTGGCATCAGCGC
Internal bar code:CCGCGGGTAAACCAAGAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTGTACTGCTTGCTCC
Suggested primer 2:GTCTATTCCTTCGGCTCGGG