Insertion junction: CLIP2.030341_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030341
Chromosome:chromosome 16
Location:7973285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691552 NDA1 Type-II NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCACCCTAACCCTGTCCTTAGCCTGCCACGCACCGTCAGGTCGTAC
Internal bar code:GGAGCTATAACTACGGACTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1529
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACCCGGCCAACTTTGAC
Suggested primer 2:GGGAAAACAAGTGCCAGCTG