Insertion junction: CLIP2.030342_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030342
Chromosome:chromosome 12
Location:4399301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801411 (1 of 1) PTHR11649//PTHR11649:SF49//PTHR22916//PTHR22916:SF9 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTGCAGCGCCAGGGACACCAGCGGCGTGTCCGGGTACAGCCGCGGCT
Internal bar code:TGCTTGTGCGCCAGCTGAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2570
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCTATGCTGCGTCGAT
Suggested primer 2:AGAAGAAGGCGATGTTGGGG