Insertion junction: CLIP2.030347_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030347
Chromosome:chromosome 6
Location:1174741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258200 (1 of 1) PF00004//PF13771 - ATPase family associated with various cellular activities (AAA) (AAA) // PHD-like zinc-binding domain (zf-HC5HC2H) CDS
Cre06.g258226 (1 of 5) 3.2.1.23 - Beta-galactosidase / Lactase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCCGCAGCAGCCGCGCGGCTGTAGCCCGCACCCGTGCTGCCGCCGCC
Internal bar code:GTGATCGCCTAGCACATTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATCCGAATGCGACAGC
Suggested primer 2:CACCTCAACAGCTACCTCCG