Insertion junction: CLIP2.030347_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030347
Chromosome:chromosome 6
Location:1174743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258200 (1 of 1) PF00004//PF13771 - ATPase family associated with various cellular activities (AAA) (AAA) // PHD-like zinc-binding domain (zf-HC5HC2H) CDS
Cre06.g258226 (1 of 5) 3.2.1.23 - Beta-galactosidase / Lactase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGAGGACCAGGCTGTAGCAGCGGCGGAGGCGGCGGAGCGGGCGCTG
Internal bar code:GGGGTGAGCAGTACACGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCAACAGCTACCTCCG
Suggested primer 2:GTCAATCCGAATGCGACAGC