Insertion junction: CLIP2.030350_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030350
Chromosome:chromosome 2
Location:1460833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083750 ROC75 (1 of 1) IPR006447//IPR009057//IPR017930 - Myb domain, plants // Homeodomain-like // Myb domain; Rhythm Of Chloroplast 75 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTTGGGCCCGGGCGGGCTGGGTCCGGGCGCGGCCGCTGCGCTGGTGG
Internal bar code:ATGTGTTAGACCTGGAACAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACCATGCAACAAGTCGCCT
Suggested primer 2:GGAGAGTTTGTTGCAGCAGC