Insertion junction: CLIP2.030354_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030354
Chromosome:chromosome 2
Location:5641464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115600 MSC7 Predicted protein with mechanosensitive ion channel domain; (1 of 1) IPR002048//IPR006685//IPR010920//IPR020568 - EF-hand domain // Mechanosensitive ion channel MscS // LSM domain // Ribosomal protein S5 domain 2-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGGCAACACGCGCGGCAGCAGCCTCACCGGCGCCGGCGAGAGCGCCG
Internal bar code:CTTCCCTCATGGAACCAAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2250
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCGTCCTTGTTTGTGTC
Suggested primer 2:TGGCGATACGGTGGTATGTG