Insertion junction: CLIP2.030360_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030360
Chromosome:chromosome 9
Location:3851720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801035 (1 of 3) IPR000104//IPR001054//IPR006059//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Solute-binding family 1 // Nucleotide cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAGTGACGGCGAGGGGGAGGGGTTGAACATCCGTGGTTTCCCTTTTC
Internal bar code:TGGTACTATATCGTTTCCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTTCACAAGACACCC
Suggested primer 2:CGCCGCATTTCGTCAATCAT