Insertion junction: CLIP2.030367_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030367
Chromosome:chromosome 2
Location:3240903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097150 AGG5 (1 of 12) PF04749 - PLAC8 family (PLAC8); Aggregation 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCGCAATCACCTGCTAACGGGCCGCCTGTGATGTCCATGCCGCTGC
Internal bar code:TACGCCTTCTCGAAGGAGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1245
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAAGACAGTGGGCTCCG
Suggested primer 2:ACGTGCTTGTCCATTGCCTA