Insertion junction: CLIP2.030375_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030375
Chromosome:chromosome 7
Location:5498037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351300 (1 of 2) PTHR11451//PTHR11451:SF41 - TRNA SYNTHETASE-RELATED // GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCAACCTCCACGCCCCCGCTCCTGCCGTGCCTTGTTACCGCGATT
Internal bar code:ACGTCGGTTTACGGGGCTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:374
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCCGCTCAGAACTTCAC
Suggested primer 2:ATACTCAAGCCGCCCCAAAA