Insertion junction: CLIP2.030375_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030375
Chromosome:chromosome 7
Location:5501037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351300 (1 of 2) PTHR11451//PTHR11451:SF41 - TRNA SYNTHETASE-RELATED // GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCACGTCGCTGGACGCCGCACGCCCTCTGCTGCTGTTTGCGGACGCT
Internal bar code:ACGTCGGTTTACGGGGCTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3721
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTCAAGCCGCCCCAAAA
Suggested primer 2:TGACCCGCTCAGAACTTCAC