Insertion junction: CLIP2.030376_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030376
Chromosome:chromosome 3
Location:5883733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188550 HEL20 (1 of 1) K14806 - ATP-dependent RNA helicase DDX31/DBP7 [EC:3.6.4.13] (DDX31, DBP7); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCTTAATCCACATCCCAATAATCATGAGTAGTCATGAATGTAACCCA
Internal bar code:GTGTCCTTTATCTGCAACGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGCTTTCGTTTCGTTTT
Suggested primer 2:ACACATCACAAACACACGCG