Insertion junction: CLIP2.030382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030382
Chromosome:chromosome 13
Location:3210240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801548 (1 of 1) PF10613 - Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGAGGCTGCCCGTACCGCCGCGTACCGCCGCCCCATACCGCCCCCC
Internal bar code:AACTAGTTTCCAATCATGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3914
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGGGACTTTCGTCGTC
Suggested primer 2:ACAACACACGTGGGGTTCTT