Insertion junction: CLIP2.030383_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030383
Chromosome:chromosome 2
Location:7484322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392542 (1 of 1) K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTTGCATACTACAGCCCGTGCTCCACCTACCATGGTCAGCTCTGGG
Internal bar code:GTATGTGATCTGTATTGAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2245
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACAACCCCACGTTCGTG
Suggested primer 2:AGTACTCCTTGCCCGTGTTG