Insertion junction: CLIP2.030392_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030392
Chromosome:chromosome 10
Location:5333790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456800 (1 of 2) PF09733 - VEFS-Box of polycomb protein (VEFS-Box) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCCGCCGCACCAAGCACACAGCGGCCGACGCCGCCAGTTGGCTAGA
Internal bar code:CCAGCCTAGCTGCAGTGCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2191
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTAGGGATGGTTGTGGG
Suggested primer 2:CTCCCTCCACCTCCATCTCA