Insertion junction: CLIP2.030396_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030396
Chromosome:chromosome 9
Location:1345889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400450 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCACTTCCCCTACCCTCGTCTCCTCCTGCACCGCGCTCCAGGGGCG
Internal bar code:GTGAAACCGGTAGGCGATCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:150
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGGGGTTGGTGTGTGT
Suggested primer 2:CTTCACCGCCTCTAGCTACG