Insertion junction: CLIP2.030397_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030397
Chromosome:chromosome 16
Location:413038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTTCACAACGCTGCCTGGTGCCAAGTACTTGATGTTGTCGGTGAGCG
Internal bar code:TTGGAAAATTTTTATGTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2177
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCTAGAGTGCTCGTTCG
Suggested primer 2:GTGGAGGAGAGTGTTGGGTG