Insertion junction: CLIP2.030401_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030401
Chromosome:chromosome 8
Location:4392264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385050 MAPK2 Mitogen-Activated Protein Kinase Homolog 2; (1 of 3) K04371 - mitogen-activated protein kinase 1/3 (MAPK1_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGGGAAGGGGCCGTGGGAGGGCTACGCGAGCTCACACGCAGGGCCT
Internal bar code:TTACGGTTAGGTTCCACGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACGACGACCTGACTCCG
Suggested primer 2:GACATGCCAAAACACCCCAC