Insertion junction: CLIP2.030409_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030409
Chromosome:chromosome 17
Location:277140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697800 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCGACTTCCGCCAGCACACACTCACCGATTGCAGCCGCTAAGCGCTT
Internal bar code:TCATACTGAAACCGGGGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4420
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGGGTGGTTGAAACGTG
Suggested primer 2:GGGTCTCTTTCCCGTTTCGT