Insertion junction: CLIP2.030415_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030415
Chromosome:chromosome 3
Location:7277576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207351 (1 of 2) PF10998 - Protein of unknown function (DUF2838) (DUF2838) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGATCACGACGTTCTCCATGGACGGCTATCCCCCCCTACAACATCCA
Internal bar code:GTTTGGGGATCCACGTCTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTTTCTCCGCCCTCAT
Suggested primer 2:CTTTTGTCTGGGCACATGGC