Insertion junction: CLIP2.030417_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030417
Chromosome:chromosome 2
Location:6315395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00131344
lncRNA_TCONS_00131345

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACTGGTTGCTGTGCACTAGTTCTATGTTCAAGGCCTGTTGTGCTGC
Internal bar code:ATAGTGCGTGATCCTGGCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGTGGACGTCGACGCTAC
Suggested primer 2:AGGCTGCGAGCTATGATTCC