Insertion junction: CLIP2.030420_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030420
Chromosome:chromosome 8
Location:3853829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381702 ALDH5,ALDH5G1 (1 of 1) 1.2.1.16 - Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Aldehyde dehydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGCCCGCTCCCTGGCGGGCGTGGCTCGCCACTGCGGCAACACGCTG
Internal bar code:GGACATTATGACGTTGTACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:393
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACCTGATGTCTCGAGTG
Suggested primer 2:TGGACATTCACACGCACGTA