Insertion junction: CLIP2.030425_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030425
Chromosome:chromosome 2
Location:4753906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108550 AOC3 (1 of 4) PTHR11785//PTHR11785:SF367 - AMINO ACID TRANSPORTER // AMINO-ACID PERMEASE BAT1; Amino acid carrier intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAAACCCCATACCGGTCATTGGTGCTCGGCGGTGCGCAGGAATGCCT
Internal bar code:CTTTAGGTGCCGGTCAATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGCAGCAGCAACGCAAA
Suggested primer 2:CATGGACGGCTTACCCTCTC