Insertion junction: CLIP2.030426_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030426
Chromosome:chromosome 16
Location:505309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692902 AHI1 Abelson-helper integration site 1; (1 of 3) PTHR22847:SF361 - JOUBERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGATGGCATGCAAGGAACCAACGAGAAGGAACCAATGAGAGCCACGGA
Internal bar code:TAAAGGCTTACCTCAATGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGTGAGGGAGAGGAAT
Suggested primer 2:AAGTCGTTACCACAGGAGCG