Insertion junction: CLIP2.030429_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030429
Chromosome:chromosome 9
Location:6070136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412750 (1 of 1) K06228 - fused (FU) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCGGCACTCGTCCTCCAAGCACGCAGTACCTGACGGCCGTATGCA
Internal bar code:GCCTTGATATAGTCGATCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCTTTGACAGAGCGGCA
Suggested primer 2:CATACCCGTACCGCTTCTCC