Insertion junction: CLIP2.030436_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030436
Chromosome:chromosome 8
Location:3692526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380151 (1 of 1) PF00628//PF15613//PF15614 - PHD-finger (PHD) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGCGGGCGTGGAGGGAGCGGACTTGCCGCCGTCCTTGTCCTTCGCCT
Internal bar code:CGGAGTGTGATATGATAGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAAAAGGTCGAGGTGGA
Suggested primer 2:CCTTCGCTTCCGTATCCTCC