Insertion junction: CLIP2.030446_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030446
Chromosome:chromosome 16
Location:5857335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679650 (1 of 1) PTHR19961:SF18 - FI19014P1 3'UTR
Cre16.g679700 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTATGCGTCTGCGCAAAGCGAGCGCGAAGGCAATCACTGAACTCCAGC
Internal bar code:AGCCTAGCTTGTATGGGATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2703
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCCTAGGCTGGGAGGAC
Suggested primer 2:GCTTTGTGTTCTGTGGCCTG