Insertion junction: CLIP2.030452_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030452
Chromosome:chromosome 12
Location:3559292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACACATGGCCAGGGACTCTCAGCGCGCGGCGGGAGCTGGTCGCGCGG
Internal bar code:CGTAATGTGTAACGGCAGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAATGCAGTGGGGCGTAT
Suggested primer 2:CTCAAGCCACTCCACCACAT