Insertion junction: CLIP2.030460_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030460
Chromosome:chromosome 10
Location:898565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423900 (1 of 1) IPR001041//IPR003611 - 2Fe-2S ferredoxin-type iron-sulfur binding domain // Nuclease associated modular domain 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGGTGCGGGCCAGAGTCCAGAAGTTCCGGGCCAAGAAGGCCAAGAAG
Internal bar code:TCGACAATTACGTAAAGTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1294
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTATACATGCGCCAGCT
Suggested primer 2:GACGGACATCCTTTCCAGCA