Insertion junction: CLIP2.030461_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030461
Chromosome:chromosome 16
Location:7215338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676981 (1 of 8) IPR008962 - PapD-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCACCTGCTTGAGCCGGTCGAGCTCGGCCTTGACGGCCGCGGCCTCT
Internal bar code:TTGGGGGCCAGCCATATGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCACCACATAGCAAGCA
Suggested primer 2:TGAGCTCTGCCTTCAGGTTG