Insertion junction: CLIP2.030464_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030464
Chromosome:chromosome 10
Location:2771472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801135 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCGCGTATAATAGGCAGGCCACAAGTTTGCCACCTATCGTCGGCGCC
Internal bar code:TTAAATGCTGCTGGGACGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3856
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATTAGTCTCCCGGCGAA
Suggested primer 2:GGACCTGACTTGCACTTCGA