Insertion junction: CLIP2.030476_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030476
Chromosome:chromosome 12
Location:4627994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522050 (1 of 1) PTHR11851//PTHR11851:SF140 - METALLOPROTEASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAATTAAGGGGGGACATTCATGATTAGAAGGCGTAGCCAGCAACAGG
Internal bar code:TTGCACTCAGGAAGGCGTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGACCGTTGCTGTTGTTG
Suggested primer 2:CCACAGTGATGGAGGACACC