Insertion junction: CLIP2.030480_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030480
Chromosome:chromosome 9
Location:2408894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGCTGACTGAGAACGCCCCCAGCGTTCGCCCACGTCGCTGAGAGGC
Internal bar code:GTTGCAACAGCCCATGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2468
LEAP-Seq percent confirming:46.4286
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCTACAGACCCACATGC
Suggested primer 2:CCGGGTCCTCCTGTAGAAGA