Insertion junction: CLIP2.030495_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030495
Chromosome:chromosome 6
Location:1359306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259401 SMM16 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 2) PTHR10108//PTHR10108:SF813 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTCCTCCTCCCCCTCCTCCCCGCGCCGCCCGCCACTCACCACTCGG
Internal bar code:TTCAGCACGGGATATTAACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGCTGGATAGAAGTCCA
Suggested primer 2:CTCCAGGCCCATCCGTATTC