Insertion junction: CLIP2.030495_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030495
Chromosome:chromosome 6
Location:1359307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259401 SMM16 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 2) PTHR10108//PTHR10108:SF813 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAGGAGGAGGAGGAGGGAAGGGCCAGGGTCGCCTCCTGGAGTCCAT
Internal bar code:TTCAGCACGGGATATTAACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:255
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAGGCCCATCCGTATTC
Suggested primer 2:TCGGGCTGGATAGAAGTCCA