Insertion junction: CLIP2.030504_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030504
Chromosome:chromosome 8
Location:551642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359600 CSE22 Predicted protein of CSE family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCTAACCATCAAACCACATCATGTGCGGTCTTGATTGATTGATTTGC
Internal bar code:TGGTAGCGGGGAGTGTATCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1427
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGGTTGAGTCTGTTACG
Suggested primer 2:GCGTTGTTGATGCTGGTGTT