Insertion junction: CLIP2.030508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030508
Chromosome:chromosome 11
Location:612364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467610 (1 of 3) PTHR10751//PTHR10751:SF2 - GUANYLATE BINDING PROTEIN // GUANYLATE-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCACACACACACACAGTCACACGCCCTCCCCGCCCACACCTGGTTG
Internal bar code:TGCTTCTTTCAATAAAAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTATCTCCACCGACGCCTC
Suggested primer 2:CACCTGTATCCCCCAAACCC