Insertion junction: CLIP2.030508_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030508
Chromosome:chromosome 11
Location:612388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467610 (1 of 3) PTHR10751//PTHR10751:SF2 - GUANYLATE BINDING PROTEIN // GUANYLATE-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGTGAGAGGGCATGTGTTGCATGGCATGCTGACCAGCTGAGAGGGC
Internal bar code:TGCTTCTTTCAATAAAAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:886
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGTATCCCCCAAACCC
Suggested primer 2:CTTATCTCCACCGACGCCTC