Insertion junction: CLIP2.030511_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030511
Chromosome:chromosome 14
Location:2779102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g626466 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAATTGCGCCTCCGTGACTTCTTACGTCTAGTAGCAAAACGACAACCC
Internal bar code:TATGTACACTGGGCAGTGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCAACCCAACGAAAACG
Suggested primer 2:GTGTAACCCCTCCCCCTACT