Insertion junction: CLIP2.030526_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030526
Chromosome:chromosome 13
Location:2181453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578050 (1 of 3) IPR002828 - Survival protein SurE-like phosphatase/nucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACCTCCCCTGTCTCAAAAAAAACCGCTCCGGCCCTCCCAACCTCCT
Internal bar code:ATCTTGTTCGCCACATGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1637
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGATTCAACCCTGGCCT
Suggested primer 2:CTCCCTTCCGACTGCGTATC