Insertion junction: CLIP2.030538_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030538
Chromosome:chromosome 4
Location:3051115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225200 FAP311 Flagellar Associated Protein 311; (1 of 5) PF13374 - Tetratricopeptide repeat (TPR_10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCAGGCAAACATGCATGACGCACAAGCAGAGGAAATCAGCAGCAACA
Internal bar code:CGTGGGCGTATTGTAGGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:608
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACCAGTAGGAGGAGCCA
Suggested primer 2:CGCTTGAAAGAAACCGCACA