Insertion junction: CLIP2.030539_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030539
Chromosome:chromosome 10
Location:1523909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428734 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCGCCGCGCCGTCCGGTGCGGCCCCCAGCGCGCCCGCAGCCACGCC
Internal bar code:TTATCCGGGTTCAGTAGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGACATCTTGGTGGACA
Suggested primer 2:TGGTACTCATGATGTCGGCG