Insertion junction: CLIP2.030540_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030540
Chromosome:chromosome 11
Location:3192417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475950 HLM16 putative N-methyltransferase; (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGATCGAGTACTGCGGCGTGCGGCTGCGCAAGCCCCTGGACGACGT
Internal bar code:GTCGGTGCGCAAAATGTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTTGGATCGCAGCAGTGA
Suggested primer 2:TACATGATCTGTCGACGCGG