Insertion junction: CLIP2.030540_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030540
Chromosome:chromosome 11
Location:3192423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475950 HLM16 putative N-methyltransferase; (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAACTCGCCCGCCTCAATGGGCTCCACCGCAAACAGGCCTGCAGCGG
Internal bar code:GTCGGTGCGCAAAATGTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2250
LEAP-Seq percent confirming:44.9612
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:71
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:TACATGATCTGTCGACGCGG
Suggested primer 2:AGTTTGGATCGCAGCAGTGA