Insertion junction: CLIP2.030548_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030548
Chromosome:chromosome 13
Location:4837702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605000 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACGCCTTCACTTCTTCATTAATAATGAATGTAACTCCCACACACATAC
Internal bar code:TGCATGTAGACCTCGTACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGGTACCTACAAACCCC
Suggested primer 2:CTTCTCCCGCCTTTCCATGT