Insertion junction: CLIP2.030561_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030561
Chromosome:chromosome 16
Location:7470804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681802 (1 of 2) PF00069//PF01590//PF07714 - Protein kinase domain (Pkinase) // GAF domain (GAF) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCATTGATGTGGTCGCACGTGTGTGCATGCACGTGCGTGCTCGCCA
Internal bar code:CATGGCCTGGACATGATCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3523
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTGCCAGTAGTGTCAG
Suggested primer 2:AGGAATGGGATGGGCATGTG